Stem-loop ppe-MIR8127

Accession

MI0026158

Description

Prunus persica ppe-MIR8127 precursor miRNA

Sequence

25673 reads, 2650.0 reads per million, 20 experiments

uccaucccauuuccugcUUUGGCUUCUGGGUUCUUGCCagaaggugcugaggcaacuguggacauacccuuugaaaaaauggacauauagucuccaacccauuuccugcuuuagcaaaucacaugcagccuucaaguugucaauuuuUUCAAAGGGUACAUCCACAGUugccuugaaaccuucuagcaagaagccaggguccaagggaggaaaugggaugga
(((((((((((((((.((((((.((((((.(((((((.(((((((..(((((((((((((((..((((((((((((((((((((.....)))).((((.......((((...............)))).......))))...))))))))))))))))..)))))))))))))))..))))))).))))))).)))))).)))))).)))))))))))))))

Structure

               g      C      G       C       gc               ca                ggacauauagucuc    ccauuuc    uuuagc 
uccaucccauuuccu cUUUGG UUCUGG UUCUUGC agaaggu  ugaggcaacugugga  uacccuuugaaaaaau              caac       cugc      a
||||||||||||||| |||||| |||||| ||||||| |||||||  |||||||||||||||  ||||||||||||||||              ||||       ||||      a
agguaggguaaagga ggaacc gggacc aagaacg ucuucca  guuccguUGACACCU  AUGGGAAACUUuuuua              guug       gacg      a
               g      u      g       a       aa               AC                -----------acu    aacuucc    uacacu 

Annotation confidence Low

Genome context

chrG2: 22081974-22082195 [+]

Mature ppe-miR8127-5p

• Accession: MIMAT0031546
• Description: Prunus persica ppe-miR8127-5p mature miRNA
• Sequence: 18 - UUUGGCUUCUGGGUUCUUGCC - 38
• Evidence: experimental ; Illumina [1]

Mature ppe-miR8127-3p

• Accession: MIMAT0031547
• Description: Prunus persica ppe-miR8127-3p mature miRNA
• Sequence: 148 - UUCAAAGGGUACAUCCACAGU - 168
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149