miRBase entry: ppe-MIR6274b

Stem-loop ppe-MIR6274b


Accession
MI0026161
Description
Prunus persica ppe-MIR6274b precursor miRNA


Sequence

6254 reads, 567.0 reads per million, 20 experiments
ggauAACACUGUUUUGCUAUUUCgacuaauaacacaaugauacguaaaauaacuuuuucacguaucauuguguuAUUGGCCGAAAAUAGCAAAAucguaauaucc
(((((..((.((((((((((((((.((((((((((((((((((((((((.....)))).)))))))))))))))))))).)).)))))))))))).))..)))))

Structure
     AC  U            -  a                    -    u 
ggauA  AC GUUUUGCUAUUU Cg cuaauaacacaaugauacgu aaaa a
|||||  || |||||||||||| || |||||||||||||||||||| |||| a
ccuau  ug uAAAACGAUAAA GC GGUUAuuguguuacuaugca uuuu c
     aa  c            A  C                    c    u 


Annotation confidence Low
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Genome context
chrG7: 3795314-3795418 [-]

Database links

Mature ppe-miR6274b-5p

Accession MIMAT0031552
Description Prunus persica ppe-miR6274b-5p mature miRNA
Sequence 5 - AACACUGUUUUGCUAUUUC - 23
Evidence experimental
Illumina [1]

Mature ppe-miR6274b-3p

Accession MIMAT0031553
Description Prunus persica ppe-miR6274b-3p mature miRNA
Sequence 75 - AUUGGCCGAAAAUAGCAAAA - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149