Stem-loop ppe-MIR8129

Accession

MI0026162

Description

Prunus persica ppe-MIR8129 precursor miRNA

Sequence

uauauauaucaguuauucucuuauccgGAUAUCCGCACAUUAUUAUUGuguggaugcuauuguaaacaggcaggaaaauagggagggguaguacaaaauacauggcguccgcacgAUAAUAAUGUCCGGAUGUCAAcguaugagaauuucuguacauauaua
(((((((..(((..((((((.(((...((((((((.((((((((((((((((((((((((.(((.....((...................))......))))))))))))))))))))))))))).))))))))...))).))))))..)))...)))))))

Structure

       -au   uu      u   ccg        C                        u   -aacag  aggaaaau 
uauauau   cag  auucuc uau   GAUAUCCG ACAUUAUUAUUGuguggaugcuau gua      gc        a
|||||||   |||  |||||| |||   |||||||| |||||||||||||||||||||||| |||      ||        g
auauaua   guc  uaagag aug   CUGUAGGC UGUAAUAAUAgcacgccugcggua cau      ug        g
       cau   uu      u   cAA        C                        -   aaaaca  auggggag 

Annotation confidence Not enough data

Genome context

chrG6: 21765562-21765723 [+]

Mature ppe-miR8129-5p

• Accession: MIMAT0031554
• Description: Prunus persica ppe-miR8129-5p mature miRNA
• Sequence: 28 - GAUAUCCGCACAUUAUUAUUG - 48
• Evidence: experimental ; Illumina [1]

Mature ppe-miR8129-3p

• Accession: MIMAT0031555
• Description: Prunus persica ppe-miR8129-3p mature miRNA
• Sequence: 116 - AUAAUAAUGUCCGGAUGUCAA - 136
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149