Stem-loop bbe-let-7a-1

Accession

MI0026170

Description

Branchiostoma belcheri bbe-let-7a-1 precursor miRNA

Literature search

1 open access papers mention bbe-let-7a-1
(3 sentences)

Sequence

23035593 reads, 90297.0 reads per million, 16 experiments

cugaggUGAGGUAGUAGGUUGUAUAGUUgagaaguacaacauuggagaugaCUGUACAACCCGUUACCUUUUuucgggucau
((((((.(((((((..((((((((((((.....................))))))))))))..))))))).)))))).....

Structure

-----      U       UA            gagaaguac 
     cugagg GAGGUAG  GGUUGUAUAGUU         a
     |||||| |||||||  ||||||||||||         a
     ggcuuU UUCCAUU  CCAACAUGUCag         c
uacug      U       GC            uagagguua 

Annotation confidence Medium

Genome context

Unknown

Mature bbe-let-7a-5p

• Accession: MIMAT0031568
• Description: Branchiostoma belcheri bbe-let-7a-5p mature miRNA
• Sequence: 7 - UGAGGUAGUAGGUUGUAUAGUU - 28
• Evidence: not_experimental

Mature bbe-let-7a-3p

• Accession: MIMAT0031569
• Description: Branchiostoma belcheri bbe-let-7a-3p mature miRNA
• Sequence: 52 - CUGUACAACCCGUUACCUUUU - 72
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500