Stem-loop bbe-mir-10a

Accession

MI0026173

Description

Branchiostoma belcheri bbe-mir-10a precursor miRNA

Literature search

1 open access papers mention bbe-mir-10a
(1 sentences)

Sequence

11562107 reads, 47350.0 reads per million, 16 experiments

cuauaugUACCCUGUAGAUCCGAAUUUGUGugagguauccacgucacaAAUUCGUUUCUGCAGGUAUAAuguagcc
(((((((((((.((((((..((((((((((((.((...)).)).))))))))))..))))))))))).))))))..

Structure

--      -     C      UC          -  a  u 
  cuauau gUACC UGUAGA  CGAAUUUGUG ug gg  
  |||||| ||||| ||||||  |||||||||| || || a
  gauguA UAUGG ACGUCU  GCUUAAacac gc cc  
cc      A     -      UU          u  a  u 

Annotation confidence Medium

Genome context

Unknown

Mature bbe-miR-10a-5p

• Accession: MIMAT0031572
• Description: Branchiostoma belcheri bbe-miR-10a-5p mature miRNA
• Sequence: 8 - UACCCUGUAGAUCCGAAUUUGUG - 30
• Evidence: not_experimental

Mature bbe-miR-10a-3p

• Accession: MIMAT0031573
• Description: Branchiostoma belcheri bbe-miR-10a-3p mature miRNA
• Sequence: 49 - AAUUCGUUUCUGCAGGUAUAA - 69
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500