Stem-loop bbe-mir-10c

Accession

MI0026175

Description

Branchiostoma belcheri bbe-mir-10c precursor miRNA

Literature search

1 open access papers mention bbe-mir-10c
(1 sentences)

Sequence

5364831 reads, 18362.0 reads per million, 16 experiments

uccccaggauUACCCUGUAGAUCCGGACUUGUGAucacgucacaacaCAAAUCCGAUUUACAGGUUAGGccugggcaa
..((((((..((.((((((((((.(((.(((((............))))).))))))))))))).))..))))))...

Structure

-uc      au  C          C   C     Aucac 
   cccagg  UA CCUGUAGAUC GGA UUGUG     g
   ||||||  || |||||||||| ||| |||||      
   gggucc  AU GGACAUUUAG CCU AACac     u
aac      GG  U          -   A     aacac 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-10c-5p

• Accession: MIMAT0031576
• Description: Branchiostoma belcheri bbe-miR-10c-5p mature miRNA
• Sequence: 11 - UACCCUGUAGAUCCGGACUUGUGA - 34
• Evidence: not_experimental

Mature bbe-miR-10c-3p

• Accession: MIMAT0058570
• Description: Branchiostoma belcheri bbe-miR-10c-3p mature miRNA
• Sequence: 48 - CAAAUCCGAUUUACAGGUUAGG - 69
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500