Stem-loop bbe-mir-125b

Accession

MI0026178

Description

Branchiostoma belcheri bbe-mir-125b precursor miRNA

Literature search

1 open access papers mention bbe-mir-125b
(1 sentences)

Sequence

298 reads, 993.0 reads per million, 8 experiments

guggagggcguaugucacccagcUCCCAAGAUCCUAACCUGUgagccauggacaucACAAGUUAGGGUCUCAGGGAaugggg
......(((....))).((((..((((.((((((((((.(((((..........))))).))))))))))..)))).)))).

Structure

guggagggcguauguca    gc    -A          C     gcca 
                 ccca  UCCC  AGAUCCUAAC UGUga    u
                 ||||  ||||  |||||||||| |||||     
                 gggu  AGGG  UCUGGGAUUG ACAcu    g
----------------g    -a    AC          A     acag 

Annotation confidence Medium

Genome context

Unknown

Mature bbe-miR-125b-5p

• Accession: MIMAT0058571
• Description: Branchiostoma belcheri bbe-miR-125b-5p mature miRNA
• Sequence: 24 - UCCCAAGAUCCUAACCUGU - 42
• Evidence: not_experimental

Mature bbe-miR-125b-3p

• Accession: MIMAT0031581
• Description: Branchiostoma belcheri bbe-miR-125b-3p mature miRNA
• Sequence: 57 - ACAAGUUAGGGUCUCAGGGA - 76
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500