Stem-loop bbe-mir-133

Accession

MI0026181

Description

Branchiostoma belcheri bbe-mir-133 precursor miRNA

Literature search

2 open access papers mention bbe-mir-133
(3 sentences)

Sequence

152527 reads, 2473.0 reads per million, 16 experiments

aguaucagggaugcugugcuAAAGCUGGUAAAUUGGAACCAAaucaacuccucaauggauUUGGUCCCCUUCAACCAGCUGUAGcauugcauuuucaaccg
.......(((((((.((((((.(((((((.....((.((((((((............)))))))).)).....))))))).)))))).)))))))......

Structure

aguauca       u      A       AAAUU  A        aacuc 
       gggaugc gugcuA AGCUGGU     GG ACCAAauc     c
       ||||||| |||||| |||||||     || ||||||||      
       uuuuacg uacGAU UCGACCA     CC UGGUUuag     u
-gccaac       u      G       ACUUC  C        guaac 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-133-5p

• Accession: MIMAT0031586
• Description: Branchiostoma belcheri bbe-miR-133-5p mature miRNA
• Sequence: 21 - AAAGCUGGUAAAUUGGAACCAA - 42
• Evidence: not_experimental

Mature bbe-miR-133-3p

• Accession: MIMAT0031585
• Description: Branchiostoma belcheri bbe-miR-133-3p mature miRNA
• Sequence: 61 - UUGGUCCCCUUCAACCAGCUGUAG - 84
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500