miRBase entry: bbe-mir-135b

Stem-loop bbe-mir-135b


Accession
MI0026183
Description
Branchiostoma belcheri bbe-mir-135b precursor miRNA


Sequence

9747 reads, 415.0 reads per million, 16 experiments
ccguguccAAUGGCUUUCAUCCUUUGUGAAugucugagcacaguuCACAUCGAUGGGGGUUAUUGGuuaagg
((....(((((((((((((((...(((((((((......))).))))))..)))))))))))))))....))

Structure
  gugu               CUU      -   cu 
cc    ccAAUGGCUUUCAUC   UGUGAA ugu  g
||    |||||||||||||||   |||||| |||   
gg    GGUUAUUGGGGGUAG   ACACuu aca  a
  aauu               -CU      g   cg 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-135b-5p

Accession MIMAT0031589
Description Branchiostoma belcheri bbe-miR-135b-5p mature miRNA
Sequence 9 - AAUGGCUUUCAUCCUUUGUGAA - 30
Evidence not_experimental

Mature bbe-miR-135b-3p

Accession MIMAT0058572
Description Branchiostoma belcheri bbe-miR-135b-3p mature miRNA
Sequence 46 - CACAUCGAUGGGGGUUAUUGG - 66
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500