Stem-loop bbe-mir-137

Accession

MI0026184

Description

Branchiostoma belcheri bbe-mir-137 precursor miRNA

Literature search

1 open access papers mention bbe-mir-137
(2 sentences)

Sequence

173652 reads, 2204.0 reads per million, 16 experiments

caaacauacgcacugcucggucACGGGUAUUCUUGGGUUAAUaauauacuuuuucuauauUAUUGCUUGAGAAUACACGUGAcugagugugugugagacuc
....(.(((((((.(((((((((((.((((((((((((.(((((((((.......))))))))))))))))))))).)))))))))))))))))).)....

Structure

caaa a       u           G            U         cu 
    c uacgcac gcucggucACG GUAUUCUUGGGU AAUaauaua  u
    | ||||||| ||||||||||| |||||||||||| |||||||||  u
    g gugugug ugagucAGUGC CAUAAGAGUUCG UUAUuauau  u
cuca a       -           A            -         cu 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-137-5p

• Accession: MIMAT0058573
• Description: Branchiostoma belcheri bbe-miR-137-5p mature miRNA
• Sequence: 23 - ACGGGUAUUCUUGGGUUAAU - 42
• Evidence: not_experimental

Mature bbe-miR-137-3p

• Accession: MIMAT0031590
• Description: Branchiostoma belcheri bbe-miR-137-3p mature miRNA
• Sequence: 61 - UAUUGCUUGAGAAUACACGUGA - 82
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500