Stem-loop bbe-mir-1

Accession

MI0026185

Description

Branchiostoma belcheri bbe-mir-1 precursor miRNA

Literature search

1 open access papers mention bbe-mir-1
(4 sentences)

Sequence

ccaggccuguuaagcauAAGUACUUCUUUACUAUCCCAUacugaacucaauuguaUGGAAUGUAAAGAAGUAUGUAUgguuagcaggcuaccacgu
...((((((((((.((((.((((((((((((.((.((((((...........)))))).)))))))))))))).)))).)))))))))).......

Structure

----cca          g    A            U  C      ugaa 
       ggccuguuaa cauA GUACUUCUUUAC AU CCAUac    c
       |||||||||| |||| |||||||||||| || ||||||    u
       ucggacgauu gUAU UAUGAAGAAAUG UA GGUaug    c
ugcacca          g    G            -  A      uuaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-miR-1-3p

• Accession: MIMAT0031591
• Description: Branchiostoma belcheri bbe-miR-1-3p mature miRNA
• Sequence: 18 - AAGUACUUCUUUACUAUCCCAU - 39
• Evidence: not_experimental

Mature bbe-miR-1-5p

• Accession: MIMAT0031592
• Description: Branchiostoma belcheri bbe-miR-1-5p mature miRNA
• Sequence: 56 - UGGAAUGUAAAGAAGUAUGUAU - 77
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500