Stem-loop bbe-mir-153

Accession

MI0026186

Description

Branchiostoma belcheri bbe-mir-153 precursor miRNA

Literature search

1 open access papers mention bbe-mir-153
(2 sentences)

Sequence

4361 reads, 162.0 reads per million, 16 experiments

uugcagguggcugCCAUUUUUGUGACCUUGCAACuguacugugaccucuggUUGCAUAGUCUCAAAAGUGAcauccuucuuguaa
.((((((.((.((.((((((((.(((..(((((((..............)))))))..))).)))))))).)).))..)))))).

Structure

u      -u  c  C        U   CU       guacug 
 ugcagg  gg ug CAUUUUUG GAC  UGCAACu      u
 ||||||  || || |||||||| |||  |||||||       
 auguuc  cc ac GUGAAAAC CUG  ACGUUgg      g
a      uu  u  A        U   AU       ucucca 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-153-5p

• Accession: MIMAT0058574
• Description: Branchiostoma belcheri bbe-miR-153-5p mature miRNA
• Sequence: 14 - CCAUUUUUGUGACCUUGCAAC - 34
• Evidence: not_experimental

Mature bbe-miR-153-3p

• Accession: MIMAT0031593
• Description: Branchiostoma belcheri bbe-miR-153-3p mature miRNA
• Sequence: 52 - UUGCAUAGUCUCAAAAGUGA - 71
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500