Stem-loop bbe-mir-182c

Accession

MI0026189

Description

Branchiostoma belcheri bbe-mir-182c precursor miRNA

Sequence

22665 reads, 529.0 reads per million, 16 experiments

accucugggucagcuuaCUUGGCACUUGUGGAAUUUUUUGcucagcaagacuuugugucaAAGAAUUCCCCAGUACUAAGUAugcuggcuugggaug
...(((((((((((.(((((((.(((.(.(((((((((((....((((....))))..)))))))))))).))).))))))).)))))))))))...

Structure

acc           u       C   U U           cuca    g 
   ucugggucagc uaCUUGG ACU G GGAAUUUUUUG    gcaa a
   ||||||||||| ||||||| ||| | |||||||||||    ||||  
   ggguucggucg AUGAAUC UGA C CCUUAAGAAac    uguu c
gua           u       A   C -           --ug    u 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-182c-5p

• Accession: MIMAT0031598
• Description: Branchiostoma belcheri bbe-miR-182c-5p mature miRNA
• Sequence: 18 - CUUGGCACUUGUGGAAUUUUUUG - 40
• Evidence: not_experimental

Mature bbe-miR-182c-3p

• Accession: MIMAT0058575
• Description: Branchiostoma belcheri bbe-miR-182c-3p mature miRNA
• Sequence: 61 - AAGAAUUCCCCAGUACUAAGUA - 82
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500