Stem-loop bbe-mir-182d

Accession

MI0026190

Description

Branchiostoma belcheri bbe-mir-182d precursor miRNA

Sequence

9530 reads, 364.0 reads per million, 16 experiments

uuggcaaguccUCUUGGAACUGGGGAAUCCUUUGuguugauuguaaagacuuuuacauggcguaucaUAGAAUUCCCCCGUACCGAGUGGucuuguaaa
...(((((.((.(((((.((.(((((((..((((((.((..((((((....)))))).....)).))))))))))))).)).))))).)).)))))...

Structure

uug     u  U     A  U       CC      u  ---au      g 
   gcaag cc CUUGG AC GGGGAAU  UUUGug ug     uguaaa a
   ||||| || ||||| || |||||||  |||||| ||     ||||||  
   uguuc GG GAGCC UG CCCCUUA  AGAUac au     acauuu c
aaa     u  U     A  C       --      u  gcggu      u 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-182d-5p

• Accession: MIMAT0058576
• Description: Branchiostoma belcheri bbe-miR-182d-5p mature miRNA
• Sequence: 12 - UCUUGGAACUGGGGAAUCCUUUG - 34
• Evidence: not_experimental

Mature bbe-miR-182d-3p

• Accession: MIMAT0031599
• Description: Branchiostoma belcheri bbe-miR-182d-3p mature miRNA
• Sequence: 68 - UAGAAUUCCCCCGUACCGAGUGG - 90
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500