Stem-loop bbe-mir-184

Accession

MI0026192

Description

Branchiostoma belcheri bbe-mir-184 precursor miRNA

Literature search

2 open access papers mention bbe-mir-184
(3 sentences)

Sequence

4580572 reads, 23696.0 reads per million, 16 experiments

guccugguuccgcacgcucccUUAUCACUUCUUCCGCCGAGCUcgugucucugagucagcUGGACGGAGAACUGAUAAGGGccugugccgaacaccaaucc
......((((.(((((..(((((((((.((((.(((((.((((.(..((...))..))))))).))))))).)))))))))..))))).))))........

Structure

--guccug    c     cu         C    U   -  G    c ug  u 
        guuc gcacg  cccUUAUCA UUCU CCG CC AGCU g  uc  
        |||| |||||  ||||||||| |||| ||| || |||| |  || c
        caag cgugu  GGGAAUAGU AAGA GGC GG Ucga c  ag  
ccuaacca    c     cc         C    -   A  -    - ug  u 

Annotation confidence Medium

Genome context

Unknown

Mature bbe-miR-184-5p

• Accession: MIMAT0031601
• Description: Branchiostoma belcheri bbe-miR-184-5p mature miRNA
• Sequence: 22 - UUAUCACUUCUUCCGCCGAGCU - 43
• Evidence: not_experimental

Mature bbe-miR-184-3p

• Accession: MIMAT0031602
• Description: Branchiostoma belcheri bbe-miR-184-3p mature miRNA
• Sequence: 61 - UGGACGGAGAACUGAUAAGGG - 81
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500