miRBase entry: bbe-mir-193b

Stem-loop bbe-mir-193b


Accession
MI0026194
Description
Branchiostoma belcheri bbe-mir-193b precursor miRNA


Sequence

406 reads, 142.0 reads per million, 16 experiments
acaugugaacAGCGGCUUGCAGGGUCAGUCGGuagaaagagauguccUACUGGCCUGCCAAGUCGGUGCuuacaugg
.(((((((.((.(((((((..((((((((.((((........)).)).))))))))..))))))).)).))))))).

Structure
a       a  G       CA        C  -  gaa 
 cauguga cA CGGCUUG  GGGUCAGU GG ua   a
 ||||||| || |||||||  |||||||| || ||    
 guacauu GU GCUGAAC  UCCGGUCA cc gu   g
g       C  G       CG        U  u  aga 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-193b-5p

Accession MIMAT0058577
Description Branchiostoma belcheri bbe-miR-193b-5p mature miRNA
Sequence 11 - AGCGGCUUGCAGGGUCAGUCGG - 32
Evidence not_experimental

Mature bbe-miR-193b-3p

Accession MIMAT0031605
Description Branchiostoma belcheri bbe-miR-193b-3p mature miRNA
Sequence 48 - UACUGGCCUGCCAAGUCGGUGC - 69
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500