Stem-loop bbe-mir-2056

Accession

MI0026199

Description

Branchiostoma belcheri bbe-mir-2056 precursor miRNA

Sequence

1608854 reads, 10045.0 reads per million, 16 experiments

acagacgacuugggcuCAGGUAUGUCUGCGGUGAGGCUgguaaacuucgacaggUUUCACUGUAGAUCUACCUGCGcucaug
..........(((((.((((((.(((((((((((((((.((........)).))))))))))))))).)))))).)))))..

Structure

acagacgacu     u      U               g  aaa 
          ugggc CAGGUA GUCUGCGGUGAGGCU gu   c
          ||||| |||||| ||||||||||||||| ||    
          acucG GUCCAU UAGAUGUCACUUUgg ca   u
--------gu     C      C               a  gcu 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-2056-5p

• Accession: MIMAT0058579
• Description: Branchiostoma belcheri bbe-miR-2056-5p mature miRNA
• Sequence: 17 - CAGGUAUGUCUGCGGUGAGGCU - 38
• Evidence: not_experimental

Mature bbe-miR-2056-3p

• Accession: MIMAT0031612
• Description: Branchiostoma belcheri bbe-miR-2056-3p mature miRNA
• Sequence: 55 - UUUCACUGUAGAUCUACCUGCG - 76
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500