Stem-loop bbe-mir-2064

Accession

MI0026208

Description

Branchiostoma belcheri bbe-mir-2064 precursor miRNA

Sequence

56332 reads, 1929.0 reads per million, 16 experiments

cuuucagccaccuuguccACGGUUGCAUUGUGUUGGUCUUUGuaaugugcgaacaAAGCAGCACUGUGCAACUGUGuagaug
..............((((((((((((((.((((((..((((((.........)))))))))))).)))))))))))..))).

Structure

cuuucagccaccuu   --           U      GU      aau 
              guc  cACGGUUGCAU GUGUUG  CUUUGu   g
              |||  ||||||||||| ||||||  ||||||   u
              uag  GUGUCAACGUG CACGAC  GAAaca   g
-------------g   au           U      --      agc 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-2064-5p

• Accession: MIMAT0031628
• Description: Branchiostoma belcheri bbe-miR-2064-5p mature miRNA
• Sequence: 19 - ACGGUUGCAUUGUGUUGGUCUUUG - 42
• Evidence: not_experimental

Mature bbe-miR-2064-3p

• Accession: MIMAT0031627
• Description: Branchiostoma belcheri bbe-miR-2064-3p mature miRNA
• Sequence: 56 - AAGCAGCACUGUGCAACUGUG - 76
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500