Stem-loop bbe-mir-2069-1

Accession

MI0026212

Description

Branchiostoma belcheri bbe-mir-2069-1 precursor miRNA

Sequence

1486 reads, 793.0 reads per million, 16 experiments

cccccgugaaAUCUAACCUGCGUCUGAAUGAGUCcgcggcugccugccguccaagagGCGACCGCAGCCGUGGACUGauacg
...........................((.(((((((((((((.((((........))))...))))))))))))).))...

Structure

cccccgugaaAUCUAACCUGCGUCUGA  G             --c    guc 
                           AU AGUCcgcggcugc   ugcc   c
                           || |||||||||||||   ||||    
                           ua UCAGGUGCCGACG   GCGg   a
------------------------gca  G             CCA    aga 

Annotation confidence Low

Genome context

Unknown

Mature bbe-miR-2069-5p

• Accession: MIMAT0058580
• Description: Branchiostoma belcheri bbe-miR-2069-5p mature miRNA
• Sequence: 11 - AUCUAACCUGCGUCUGAAUGAGUC - 34
• Evidence: not_experimental

Mature bbe-miR-2069-3p

• Accession: MIMAT0031635
• Description: Branchiostoma belcheri bbe-miR-2069-3p mature miRNA
• Sequence: 58 - GCGACCGCAGCCGUGGACUG - 77
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500