Stem-loop bbe-mir-216

Accession

MI0026221

Description

Branchiostoma belcheri bbe-mir-216 precursor miRNA

Literature search

1 open access papers mention bbe-mir-216
(2 sentences)

Sequence

ugguugugUAAUCUCAGCUGGCAACUGUGAGucuaacuucacauccuCACGGUGCAAGCUGGGAUCGCUcaaacu
...(((.((.(((((((((.(((.(((((((..............)))))))))).))))))))).)).)))...

Structure

ugg   u  A         G   A       ucuaac 
   uug gU AUCUCAGCU GCA CUGUGAG      u
   ||| || ||||||||| ||| |||||||       
   aac CG UAGGGUCGA CGU GGCACuc      u
uca   U  C         A   -       cuacac 

Annotation confidence Low

Genome context

Unknown

Mature bbe-miR-216-5p

• Accession: MIMAT0031646
• Description: Branchiostoma belcheri bbe-miR-216-5p mature miRNA
• Sequence: 9 - UAAUCUCAGCUGGCAACUGUGAG - 31
• Evidence: not_experimental

Mature bbe-miR-216-3p

• Accession: MIMAT0031647
• Description: Branchiostoma belcheri bbe-miR-216-3p mature miRNA
• Sequence: 48 - CACGGUGCAAGCUGGGAUCGCU - 69
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500