Stem-loop bbe-mir-219-1

Accession

MI0026223

Description

Branchiostoma belcheri bbe-mir-219-1 precursor miRNA

Sequence

36051 reads, 417.0 reads per million, 16 experiments

ccagugcUGAUUGUCCAAACGCAAUUCUUGuuugaccuuugaaccAAGAACUGCGCUGGACAUCAGCAauugacgcugccuac
.((((((((((.(((((..((((.(((((((((((...))))).)))))).)))).))))))))))).))))...........

Structure

----------c    -      U     AA    A      -     c 
           cagu gcUGAU GUCCA  CGCA UUCUUG uuuga  
           |||| |||||| |||||  |||| |||||| ||||| c
           guua CGACUA CAGGU  GCGU AAGAAc aaguu  
cauccgucgca    A      -     -C    C      c     u 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-219-5p

• Accession: MIMAT0031650
• Description: Branchiostoma belcheri bbe-miR-219-5p mature miRNA
• Sequence: 8 - UGAUUGUCCAAACGCAAUUCUUG - 30
• Evidence: not_experimental

Mature bbe-miR-219-3p

• Accession: MIMAT0031651
• Description: Branchiostoma belcheri bbe-miR-219-3p mature miRNA
• Sequence: 46 - AAGAACUGCGCUGGACAUCAGCA - 68
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500