Stem-loop bbe-mir-34f

Accession

MI0026240

Description

Branchiostoma belcheri bbe-mir-34f precursor miRNA

Literature search

1 open access papers mention bbe-mir-34f
(1 sentences)

Sequence

516 reads, 224.0 reads per million, 14 experiments

uguuguggugUGGCAGUGCGAAUAGCUGGccgcgguguaccuuaccgcgacGGCCUCUCUUCACACUACCUcaccacggca
((((((((((.((.((((.(((.((..((((((((((.....))))))...)))).)).))).)))).)).))))))))))

Structure

          U  C    C   U  CU    ---      u 
uguuguggug GG AGUG GAA AG  GGcc   gcggug a
|||||||||| || |||| ||| ||  ||||   |||||| c
acggcaccac CC UCAC CUU UC  CCGG   cgccau c
          U  A    A   C  -U    cag      u 

Annotation confidence Medium

Genome context

Unknown

Mature bbe-miR-34f-5p

• Accession: MIMAT0031675
• Description: Branchiostoma belcheri bbe-miR-34f-5p mature miRNA
• Sequence: 11 - UGGCAGUGCGAAUAGCUGG - 29
• Evidence: not_experimental

Mature bbe-miR-34f-3p

• Accession: MIMAT0058586
• Description: Branchiostoma belcheri bbe-miR-34f-3p mature miRNA
• Sequence: 52 - GGCCUCUCUUCACACUACCU - 71
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500