Stem-loop bbe-mir-4863

Accession

MI0026246

Description

Branchiostoma belcheri bbe-mir-4863 precursor miRNA

Sequence

739 reads, 279.0 reads per million, 16 experiments

ccuugccuggucaugcAGACAACAUCAGAAUGUCCCUACggguuuguacagguagUAGGGCCAUUUUGUGUUGUCAGcaggaccagugcaguu
..((((((((((.(((.(((((((.(((((((.((((((...............)))))).)))))))))))))).))).)))))).))))..

Structure

cc    -      a   A       U       U      ggguuu 
  uugc cugguc ugc GACAACA CAGAAUG CCCUAC      g
  |||| |||||| ||| ||||||| ||||||| ||||||      u
  gacg gaccag acG CUGUUGU GUUUUAC GGGAUg      a
uu    u      g   A       -       C      auggac 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-4863-5p

• Accession: MIMAT0031683
• Description: Branchiostoma belcheri bbe-miR-4863-5p mature miRNA
• Sequence: 17 - AGACAACAUCAGAAUGUCCCUAC - 39
• Evidence: not_experimental

Mature bbe-miR-4863-3p

• Accession: MIMAT0031684
• Description: Branchiostoma belcheri bbe-miR-4863-3p mature miRNA
• Sequence: 56 - UAGGGCCAUUUUGUGUUGUCAG - 77
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500