Stem-loop bbe-mir-4868b

Accession

MI0026252

Description

Branchiostoma belcheri bbe-mir-4868b precursor miRNA

Sequence

17612 reads, 558.0 reads per million, 16 experiments

aaagugugucagcuuccCCCAUCACACCGGAGGCUGUUAcgucauucuguuguaUCAGCUCCAGCUGUGAUGAGUGaagaggcaugcaca
...(((((((..((((.(.((((((((.((((.(((.((((.((...)).)))).))))))).).))))))).).)))).)))))))...

Structure

aaa       ag    c C       - C    G   U    u  u 
   guguguc  cuuc C CAUCACA C GGAG CUG UAcg ca  
   |||||||  |||| | ||||||| | |||| ||| |||| || u
   cguacgg  gaaG G GUAGUGU G CCUC GAC augu gu  
aca       -a    U A       C A    -   U    u  c 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-4868b-5p

• Accession: MIMAT0058589
• Description: Branchiostoma belcheri bbe-miR-4868b-5p mature miRNA
• Sequence: 18 - CCCAUCACACCGGAGGCUGUUA - 39
• Evidence: not_experimental

Mature bbe-miR-4868b-3p

• Accession: MIMAT0031693
• Description: Branchiostoma belcheri bbe-miR-4868b-3p mature miRNA
• Sequence: 55 - UCAGCUCCAGCUGUGAUGAGUG - 76
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500