Stem-loop bbe-mir-4879

Accession

MI0026259

Description

Branchiostoma belcheri bbe-mir-4879 precursor miRNA

Sequence

258067 reads, 2534.0 reads per million, 16 experiments

cgcagauguUAAACUAUCGUUCUGGGAACAGucgcucuuacaagcugUUUCCAUGGAGAUAGCUUAGcaacuccu
.(.((.((((((.(((((.(((((((((((((...........)))))))))).)))))))).)))))).)).).

Structure

c c  a      A     G   -          cgcu 
 g ag uguUAA CUAUC UUC UGGGAACAGu    c
 | || |||||| ||||| ||| ||||||||||    u
 c uc acGAUU GAUAG AGG ACCUUUgucg    u
u c  a      C     -   U          aaca 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-4879-5p

• Accession: MIMAT0031702
• Description: Branchiostoma belcheri bbe-miR-4879-5p mature miRNA
• Sequence: 10 - UAAACUAUCGUUCUGGGAACAG - 31
• Evidence: not_experimental

Mature bbe-miR-4879-3p

• Accession: MIMAT0058591
• Description: Branchiostoma belcheri bbe-miR-4879-3p mature miRNA
• Sequence: 48 - UUUCCAUGGAGAUAGCUUAG - 67
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500