Stem-loop bbe-mir-4887

Accession

MI0026261

Description

Branchiostoma belcheri bbe-mir-4887 precursor miRNA

Sequence

70992 reads, 1300.0 reads per million, 16 experiments

cucguugaugggcguaUUCUCGAUUGUUCUGGUCCAGcucuaucuuugugcUGAACCAUUACAACCGUGAguacgucaucaaugcca
..(((((((((.(((((((.((.((((..((((.((((.(.......).)))).))))..)))).)).))))))))))))))))...

Structure

-cu         g       U  A    UC    C    u ua 
   cguugaugg cguaUUC CG UUGU  UGGU CAGc c  u
   ||||||||| ||||||| || ||||  |||| |||| |  c
   guaacuacu gcaugAG GC AACA  ACCA GUcg g  u
acc         -       U  C    UU    A    u uu 

Annotation confidence Medium

Genome context

Unknown

Mature bbe-miR-4887-5p

• Accession: MIMAT0031704
• Description: Branchiostoma belcheri bbe-miR-4887-5p mature miRNA
• Sequence: 17 - UUCUCGAUUGUUCUGGUCCAG - 37
• Evidence: not_experimental

Mature bbe-miR-4887-3p

• Accession: MIMAT0058592
• Description: Branchiostoma belcheri bbe-miR-4887-3p mature miRNA
• Sequence: 52 - UGAACCAUUACAACCGUGA - 70
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500