Stem-loop bbe-mir-4889b

Accession

MI0026263

Description

Branchiostoma belcheri bbe-mir-4889b precursor miRNA

Sequence

1338 reads, 248.0 reads per million, 16 experiments

agagcuuuuuaaucUUCCUAGCGCCACGGGUCGAUUGuaaagucuacaucuaAUCGGCCCUGACGCUUGGAAuauuaaagggcu
..(((((((((((.((((.((((.((.((((((((((((.....))))....)))))))))).)))).)))).)))))))))))

Structure

ag           c    U    C  C        ----    a 
  agcuuuuuaau UUCC AGCG CA GGGUCGAU    UGua a
  ||||||||||| |||| |||| || ||||||||    |||| g
  ucgggaaauua AAGG UCGC GU CCCGGCUA    acau u
--           u    U    A  -        aucu    c 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-4889b-5p

• Accession: MIMAT0058593
• Description: Branchiostoma belcheri bbe-miR-4889b-5p mature miRNA
• Sequence: 15 - UUCCUAGCGCCACGGGUCGAUUG - 37
• Evidence: not_experimental

Mature bbe-miR-4889b-3p

• Accession: MIMAT0031706
• Description: Branchiostoma belcheri bbe-miR-4889b-3p mature miRNA
• Sequence: 53 - AUCGGCCCUGACGCUUGGAA - 72
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500