Stem-loop bbe-mir-71

Accession

MI0026271

Description

Branchiostoma belcheri bbe-mir-71 precursor miRNA

Literature search

1 open access papers mention bbe-mir-71
(2 sentences)

Sequence

ugucuaguugccacuacauugUGAAAGACAUGGGUAGUGAGAUuuguaucauggagucauCCCAUUUCCCUGUCUUUCAACAaggugcuggcaguuuagca
((.((((.(((((.(((.((((((((((((.(((.((((.((..((..((...))..)))).)))).))))))))))).)))).))).)))))..))))))

Structure

  u    -u     c   a    -        U   U    A  Uu  ua  a 
ug cuag  ugcca uac uugU GAAAGACA GGG AGUG GA  ug  uc  
|| ||||  ||||| ||| |||| |||||||| ||| |||| ||  ||  || u
ac gauu  acggu gug aACA CUUUCUGU CCC UUAC Cu  ac  ag  
  -    ug     c   g    A        -   U    C  --  ug  g 

Annotation confidence Low

Genome context

Unknown

Mature bbe-miR-71-5p

• Accession: MIMAT0031717
• Description: Branchiostoma belcheri bbe-miR-71-5p mature miRNA
• Sequence: 22 - UGAAAGACAUGGGUAGUGAGAU - 43
• Evidence: not_experimental

Mature bbe-miR-71-3p

• Accession: MIMAT0031718
• Description: Branchiostoma belcheri bbe-miR-71-3p mature miRNA
• Sequence: 61 - CCCAUUUCCCUGUCUUUCAACA - 82
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500