Stem-loop bbe-mir-92a-2

Accession

MI0026273

Description

Branchiostoma belcheri bbe-mir-92a-2 precursor miRNA

Sequence

89850 reads, 1960.0 reads per million, 16 experiments

auagaacauggccuugucagacAGGCCAGGAUUGGUUGCAAUGCUggaugucaugucagUAUUGCACUUGUCCCGGCCUUUcugauugggcaaaaaucuac
.((((.....((((.((((((.(((((.((((.(((.((((((((((........))))))))))))).)))).))))).)))))).)))).....)))).

Structure

a    acaug    u      c     A    U   U          aug 
 uaga     gccu gucaga AGGCC GGAU GGU GCAAUGCUgg   u
 ||||     |||| |||||| ||||| |||| ||| ||||||||||    
 aucu     cggg uagucU UCCGG CCUG UCA CGUUAUgacu   c
c    aaaaa    u      U     C    U   -          gua 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-92a-2-5p

• Accession: MIMAT0058595
• Description: Branchiostoma belcheri bbe-miR-92a-2-5p mature miRNA
• Sequence: 23 - AGGCCAGGAUUGGUUGCAAUGCU - 45
• Evidence: not_experimental

Mature bbe-miR-92a-3p

• Accession: MIMAT0031720
• Description: Branchiostoma belcheri bbe-miR-92a-3p mature miRNA
• Sequence: 60 - UAUUGCACUUGUCCCGGCCUUU - 81
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500