Accession
MI0026312
Description
Brugia malayi
bma-mir-5365b precursor miRNA
Literature search
2 open access papers mention bma-mir-5365b
(2 sentences)
(2 sentences)
Sequence
516
reads,
31.0
reads per million, 11 experiments
uauuacaauuuuuuCGUUUGUCUUCUCUUAAUCGUAuaagugugggugaUGAUUAAGAGAACACAAUCGAAUuugcuguaau
.((((((.....((((.((((.(((((((((((((((........)).))))))))))))).)))).)))).....))))))
.((((((.....((((.((((.(((((((((((((((........)).))))))))))))).)))).)))).....))))))
Structure
u auuuu U C - aag auuaca uuCG UUGU UUCUCUUAAUCGU Au u |||||| |||| |||| ||||||||||||| || uaaugu AAGC AACA AAGAGAAUUAGUa ug g - cguuU U C g ggu
Annotation confidence
High
Do you think this miRNA is real?
Comments
This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].
Genome context
Bmal_v3_scaffold33: 146574-146655 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bma-mir-5365b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bma-miR-5365b-5p
| Accession | MIMAT0057252 |
| Description | Brugia malayi bma-miR-5365b-5p mature miRNA |
| Sequence | 15 - CGUUUGUCUUCUCUUAAUCGUA - 36 |
| Evidence |
experimental
Illumina [2] |
Mature bma-miR-5365b-3p
| Accession | MIMAT0031757 |
| Description | Brugia malayi bma-miR-5365b-3p mature miRNA |
| Sequence | 50 - UGAUUAAGAGAACACAAUCGAAU - 72 |
| Evidence |
experimental
Illumina [2] |
References
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