miRBase entry: cpa-MIR156e

Stem-loop cpa-MIR156e


Accession
MI0026332
Description
Carica papaya cpa-MIR156e precursor miRNA

Literature search
2 open access papers mention cpa-MIR156e
(17 sentences)

Sequence

UUGACAGAAGAUAGAGAGCACagaugaugaaaugcaaauuagaaggaccaaacagugcaucucacuccuuugugcucucuauucuucugucauca
.(((((((((((((((((((((((.(((((.(((((...................))))).))).)).))))))))))))).))))))))))...

Structure
--U          -             u  -   a     aauuagaa 
   UGACAGAAGA UAGAGAGCACaga ga uga augca        g
   |||||||||| ||||||||||||| || ||| |||||        g
   acugucuucu aucucucguguuu cu acu uacgu        a
acu          u             c  c   c     gacaaacc 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature cpa-miR156e

Accession MIMAT0031778
Description Carica papaya cpa-miR156e mature miRNA
Sequence 1 - UUGACAGAAGAUAGAGAGCAC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23216749
    Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
    Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
    BMC Genomics (2012) 13:682