Stem-loop cpa-MIR160d

Accession

MI0026340

Description

Carica papaya cpa-MIR160d precursor miRNA

Literature search

3 open access papers mention cpa-MIR160d
(5 sentences)

Sequence

UGCCUGGCUCCCUGAAUGCCAucuaagaagccuuggcaaagaguguuggcaaccuucuuacuuggcaugaggggagucaugcagg
(((.(((((((((..((((((..(((((((..(((.(((......))).))).)))))))..))))))..))))))))).)))..

Structure

--   C         GA      uc       cc   g   ag 
  UGC UGGCUCCCU  AUGCCA  uaagaag  uug caa  a
  ||| |||||||||  ||||||  |||||||  ||| |||   
  acg acugagggg  uacggu  auucuuc  aac guu  g
gg   u         ag      uc       -c   g   gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR160d

• Accession: MIMAT0031787
• Description: Carica papaya cpa-miR160d mature miRNA
• Sequence: 1 - UGCCUGGCUCCCUGAAUGCCA - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682