Stem-loop cpa-MIR167d

Accession

MI0026356

Description

Carica papaya cpa-MIR167d precursor miRNA

Literature search

2 open access papers mention cpa-MIR167d
(2 sentences)

Sequence

UGAAGCUGCCAGCAUGAUCUGAgcuuuuuccguguugauuugccauaucaggagagcauagaucauguggcaguuucauc
(((((((((((.(((((((((.((((..(((....((((.......))))))))))).))))))))))))))))))))..

Structure

--           G         A    uu   gugu    uu 
  UGAAGCUGCCA CAUGAUCUG gcuu  ucc    ugau  g
  ||||||||||| ||||||||| ||||  |||    ||||  c
  acuuugacggu guacuagau cgag  agg    acua  c
cu           -         a    --   ----    ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR167d

• Accession: MIMAT0031804
• Description: Carica papaya cpa-miR167d mature miRNA
• Sequence: 1 - UGAAGCUGCCAGCAUGAUCUGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682