Stem-loop cpa-MIR171b

Accession

MI0026359

Description

Carica papaya cpa-MIR171b precursor miRNA

Literature search

1 open access papers mention cpa-MIR171b
(1 sentences)

Sequence

uauuggugcgguucaaucggagagcauuacucuaaaguguagagacguguuguuUGAUUGAGCCGUGCCAAUAUC
(((((((((((((((((((((.(((((..(((((.....)))))..))))).)))))))))))))))))))))..

Structure

--                     g     ua     a 
  uauuggugcgguucaaucgga agcau  cucua a
  ||||||||||||||||||||| |||||  ||||| g
  AUAACCGUGCCGAGUUAGUuu uugug  gagau u
CU                     g     ca     g 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR171b

• Accession: MIMAT0031807
• Description: Carica papaya cpa-miR171b mature miRNA
• Sequence: 55 - UGAUUGAGCCGUGCCAAUAUC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682