Stem-loop cpa-MIR5211

Accession

MI0026403

Description

Carica papaya cpa-MIR5211 precursor miRNA

Sequence

ugucgcaggagcgauggcaccgguuggguuaauugcuuucugucuugauaaacaugaagcuaaaccugcagucuagugGUGCCGUCGCACUGUGACAAG
((((((((..((((((((((((.(((((((....(((((.(((........))).)))))..))))))......).)))))))))))).))))))))..

Structure

--        ga            g ------      aauu     c   cuu 
  ugucgcag  gcgauggcaccg u      uggguu    gcuuu ugu   g
  ||||||||  |||||||||||| |      ||||||    ||||| |||    
  ACAGUGUC  CGCUGCCGUGgu a      guccaa    cgaag aca   a
GA        -A            g ucugac      --au     u   aau 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR5211

• Accession: MIMAT0031851
• Description: Carica papaya cpa-miR5211 mature miRNA
• Sequence: 79 - GUGCCGUCGCACUGUGACAAG - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682