Stem-loop lus-MIR171j

Accession

MI0026409

Description

Linum usitatissimum lus-MIR171j precursor miRNA

Literature search

3 open access papers mention lus-MIR171j
(6 sentences)

Sequence

gguauuggcgcgccucaaucggaaggcauggcuaauauacauuuaccagaagcuggaugaccaaaugaguaaauauugauaagauugaugaugauuaauuagccauguggauuuuUGAUUGAGCCGCGUCAAUAUC
((((((((((((.(((((((((((((((((((((((....((((((((.....(((....)))..)).))))))...........((((....)))))))))))))))...)))))))))))).))))))))))))

Structure

            c            ---           -------------------auac      -  gaagc   a 
gguauuggcgcg cucaaucggaag   gcauggcuaau                       auuuac ca     ugg u
|||||||||||| ||||||||||||   |||||||||||                       |||||| ||     |||  
CUAUAACUGCGC GAGUUAGUuuuu   uguaccgauua                       uaaaug gu     acc g
            C            agg           auuaguaguaguuagaauaguua      a  ---aa   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR171j

• Accession: MIMAT0031857
• Description: Linum usitatissimum lus-miR171j mature miRNA
• Sequence: 116 - UGAUUGAGCCGCGUCAAUAUC - 136
• Evidence: not_experimental

References

1. PubMed ID: 22841625
   Identification and characterization of miRNAs and their potential targets in flax
   "Neutelings G, Fenart S, Lucau-Danila A, Hawkins S"
   "J Plant Physiol (2012) 169:1754-1766