Stem-loop ssa-let-7g-1

Accession

MI0026426

Description

Salmo salar ssa-let-7g-1 precursor miRNA

Literature search

2 open access papers mention ssa-let-7g-1
(6 sentences)

Sequence

1955723 reads, 7713.0 reads per million, 87 experiments

UGAGGUAGUAGUUUGUAUAGUUuuaggaucacaccagaucugggagaugaCUAUACAGUCUACUGUCUUUCc
.((((((((((.((((((((((...(((((......))))).......)))))))))).))))))))))...

Structure

--U          U          ----uua     ac 
   GAGGUAGUAG UUGUAUAGUU       ggauc  a
   |||||||||| ||||||||||       |||||   
   UUCUGUCAUC GACAUAUCag       ucuag  c
cCU          U          uagaggg     ac 

Annotation confidence High

Genome context

Unknown

Mature ssa-let-7g-5p

• Accession: MIMAT0032270
• Description: Salmo salar ssa-let-7g-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGUUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-let-7g-3p

• Accession: MIMAT0032271
• Description: Salmo salar ssa-let-7g-3p mature miRNA
• Sequence: 51 - CUAUACAGUCUACUGUCUUUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482