Stem-loop ssa-let-7h

Accession

MI0026428

Description

Salmo salar ssa-let-7h precursor miRNA

Literature search

2 open access papers mention ssa-let-7h
(5 sentences)

Sequence

UGAGGUAGUAAGUUGUGUUGUUguuggggaucaggauagugcgccccguacgggagauaaCUAUACAACUUACUGCCUUCCU
.(((((((((((((((((.((((((((((..((......))..))))........)))))).)))))))))))))))))...

Structure

--U                 U      --------    au  gg 
   GAGGUAGUAAGUUGUGU GUUguu        gggg  ca  a
   ||||||||||||||||| ||||||        ||||  ||   
   UUCCGUCAUUCAACAUA Caauag        cccc  gu  u
UCC                 U      agggcaug    gc  ga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-let-7h-5p

• Accession: MIMAT0032272
• Description: Salmo salar ssa-let-7h-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAAGUUGUGUUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-let-7h-3p

• Accession: MIMAT0032273
• Description: Salmo salar ssa-let-7h-3p mature miRNA
• Sequence: 61 - CUAUACAACUUACUGCCUUCCU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482