Stem-loop ssa-mir-100a-2

Accession

MI0026432

Description

Salmo salar ssa-mir-100a-2 precursor miRNA

Sequence

AACCCGUAGAUCCGAACUUGUGuugucuggccacACAAGCUUGUGUCUAUAGGUAUG
.(((.((((((.(((.(((((((.((...)).))))))).))).)))))).)))...

Structure

--A   C      C   A       u  c 
   ACC GUAGAU CGA CUUGUGu gu  
   ||| |||||| ||| ||||||| || u
   UGG UAUCUG GUU GAACAca cg  
GUA   A      U   C       c  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-100a-5p

• Accession: MIMAT0032277
• Description: Salmo salar ssa-miR-100a-5p mature miRNA
• Sequence: 1 - AACCCGUAGAUCCGAACUUGUG - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-100a-2-3p

• Accession: MIMAT0032279
• Description: Salmo salar ssa-miR-100a-2-3p mature miRNA
• Sequence: 35 - ACAAGCUUGUGUCUAUAGGUAUG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482