Stem-loop ssa-mir-106a-2

Accession

MI0026439

Description

Salmo salar ssa-mir-106a-2 precursor miRNA

Sequence

UAAAGUGCUUACAGUGCAGGUAaugguuauucccuauaucuaCCGCAAUGUGAGCACUUCUGUC
..(((((((((((.(((.((((((((.......))))...))))))).))))))))))).....

Structure

---UA           G   A    ---    uu 
     AAGUGCUUACA UGC GGUA   augg  a
     ||||||||||| ||| ||||   ||||  u
     UUCACGAGUGU ACG CCau   uauc  u
CUGUC           A   -    cua    cc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-106a-5p

• Accession: MIMAT0032286
• Description: Salmo salar ssa-miR-106a-5p mature miRNA
• Sequence: 1 - UAAAGUGCUUACAGUGCAGGUA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-106a-3p

• Accession: MIMAT0032287
• Description: Salmo salar ssa-miR-106a-3p mature miRNA
• Sequence: 43 - CCGCAAUGUGAGCACUUCUGUC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482