Stem-loop ssa-mir-122-2

Accession

MI0026451

Description

Salmo salar ssa-mir-122-2 precursor miRNA

Literature search

1 open access papers mention ssa-mir-122-2
(38 sentences)

Sequence

UGGAGUGUGACAAUGGUGUUUGuguucucugcaaucaAACGCCAUUAUCACACUAAAUA
...(((((((.((((((((((((((.....)))..))))))))))).))))))).....

Structure

--UGG       C           --   u 
     AGUGUGA AAUGGUGUUUG  ugu c
     ||||||| |||||||||||  ||| u
     UCACACU UUACCGCAAac  acg c
AUAAA       A           ua   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-122-5p

• Accession: MIMAT0032301
• Description: Salmo salar ssa-miR-122-5p mature miRNA
• Sequence: 1 - UGGAGUGUGACAAUGGUGUUUG - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-122-2-3p

• Accession: MIMAT0032303
• Description: Salmo salar ssa-miR-122-2-3p mature miRNA
• Sequence: 38 - AACGCCAUUAUCACACUAAAUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482