Stem-loop ssa-mir-125b-3

Accession

MI0026456

Description

Salmo salar ssa-mir-125b-3 precursor miRNA

Literature search

3 open access papers mention ssa-mir-125b-3
(9 sentences)

Sequence

UCCCUGAGACCCUUAACCUGUGAcuacuuuaaaggucACAGGUGAGGACCUUGGGAACA
((((.(((..(((((.(((((((((........))))))))))))))..)))))))...

Structure

---    U   AC     A         acu 
   UCCC GAG  CCUUA CCUGUGAcu   u
   |||| |||  ||||| |||||||||    
   AGGG UUC  GGAGU GGACAcugg   u
ACA    -   CA     -         aaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-125b-5p

• Accession: MIMAT0032307
• Description: Salmo salar ssa-miR-125b-5p mature miRNA
• Sequence: 1 - UCCCUGAGACCCUUAACCUGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-125b-3-3p

• Accession: MIMAT0032310
• Description: Salmo salar ssa-miR-125b-3-3p mature miRNA
• Sequence: 38 - ACAGGUGAGGACCUUGGGAACA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482