Stem-loop ssa-mir-126-1

Accession

MI0026457

Description

Salmo salar ssa-mir-126-1 precursor miRNA

Sequence

CAUUAUUACUUUUGGUACGCGcuaggccagucucaaacUCGUACCGUGAGUAAUAAUGCA
(((((((((((.(((((((.(..((......))....).))))))).)))))))))))..

Structure

--           U       C --cu  gc 
  CAUUAUUACUU UGGUACG G    ag  c
  ||||||||||| ||||||| |    ||   
  GUAAUAAUGAG GCCAUGC c    uc  a
AC           U       U aaac  ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-126-5p

• Accession: MIMAT0032311
• Description: Salmo salar ssa-miR-126-5p mature miRNA
• Sequence: 1 - CAUUAUUACUUUUGGUACGCG - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-126-3p

• Accession: MIMAT0032312
• Description: Salmo salar ssa-miR-126-3p mature miRNA
• Sequence: 39 - UCGUACCGUGAGUAAUAAUGCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482