Stem-loop ssa-mir-129-1

Accession

MI0026465

Description

Salmo salar ssa-mir-129-1 precursor miRNA

Sequence

CUUUUUGCGGUCUGGGCUUGCuguucauaaauaucagucugggAAGCCCUUACCCCAAAAAGCAU
(((((((.(((..((((((.(((..(..........)..))).))))))..))).)))))))...

Structure

---       C   CU      G   uu auaa 
   CUUUUUG GGU  GGGCUU Cug  c    a
   ||||||| |||  |||||| |||  |     
   GAAAAAC CCA  CCCGAA ggu  g    u
UAC       C   UU      g   cu acua 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-129-5p

• Accession: MIMAT0032318
• Description: Salmo salar ssa-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-129-3p

• Accession: MIMAT0032319
• Description: Salmo salar ssa-miR-129-3p mature miRNA
• Sequence: 44 - AAGCCCUUACCCCAAAAAGCAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482