Stem-loop ssa-mir-129-3

Accession

MI0026467

Description

Salmo salar ssa-mir-129-3 precursor miRNA

Sequence

CUUUUUGCGGUCUGGGCUUGCuguucauaaggcaguagccaggAAGCCCUUACCCCAAAAAGUAU
(((((((.(((..((((((.((........(((....))))).))))))..))).)))))))...

Structure

---       C   CU      G  guucauaa   a 
   CUUUUUG GGU  GGGCUU Cu        ggc g
   ||||||| |||  |||||| ||        |||  
   GAAAAAC CCA  CCCGAA ga        ccg u
UAU       C   UU      g  --------   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-129-5p

• Accession: MIMAT0032318
• Description: Salmo salar ssa-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-129-3-3p

• Accession: MIMAT0032320
• Description: Salmo salar ssa-miR-129-3-3p mature miRNA
• Sequence: 44 - AAGCCCUUACCCCAAAAAGUAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482