Stem-loop ssa-mir-130a-1

Accession

MI0026468

Description

Salmo salar ssa-mir-130a-1 precursor miRNA

Sequence

ACUCUUUCCCUGUUGCACUACUgugggagcuguagcuagCAGUGCAACAAUGAAAGGGCA
.(((((((..(((((((((.((.....(((....))))).)))))))))..)))))))..

Structure

-A       CC         A  guggg   u 
  CUCUUUC  UGUUGCACU CU     agc g
  |||||||  ||||||||| ||     |||  
  GGGAAAG  ACAACGUGA ga     ucg u
AC       UA         C  -----   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-130a-5p

• Accession: MIMAT0032321
• Description: Salmo salar ssa-miR-130a-5p mature miRNA
• Sequence: 1 - ACUCUUUCCCUGUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-130a-3p

• Accession: MIMAT0032322
• Description: Salmo salar ssa-miR-130a-3p mature miRNA
• Sequence: 40 - CAGUGCAACAAUGAAAGGGCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482