Stem-loop ssa-mir-130d-1

Accession

MI0026472

Description

Salmo salar ssa-mir-130d-1 precursor miRNA

Sequence

GCUCUUUUAAUGUUGUACUACUgugaaaucagaugagCAGUGCAAUAUUAAAAGGGCA
(((((((((((((((((((.((.............)).))))))))))))))))))).

Structure

-                   A  gugaa 
 GCUCUUUUAAUGUUGUACU CU     a
 ||||||||||||||||||| ||     u
 CGGGAAAAUUAUAACGUGA ga     c
A                   C  guaga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-130d-1-5p

• Accession: MIMAT0032327
• Description: Salmo salar ssa-miR-130d-1-5p mature miRNA
• Sequence: 1 - GCUCUUUUAAUGUUGUACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-130d-3p

• Accession: MIMAT0032328
• Description: Salmo salar ssa-miR-130d-3p mature miRNA
• Sequence: 38 - CAGUGCAAUAUUAAAAGGGCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482