Stem-loop ssa-mir-132-4

Accession

MI0026478

Description

Salmo salar ssa-mir-132-4 precursor miRNA

Sequence

ACCGUGGCAUUAGAUUGUUACUguagcaacagcaccacuggUAACAGUCUACAGCCAUGGUCG
((((((((..((((((((((((((.((....))...)).))))))))))))..))))))))..

Structure

--        AU            -  --a  a 
  ACCGUGGC  UAGAUUGUUACU gu   gc a
  ||||||||  |||||||||||| ||   ||  
  UGGUACCG  AUCUGACAAUgg ca   cg c
GC        AC            u  cca  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-132-3p

• Accession: MIMAT0032332
• Description: Salmo salar ssa-miR-132-3p mature miRNA
• Sequence: 42 - UAACAGUCUACAGCCAUGGUCG - 63
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-132-4-5p

• Accession: MIMAT0032334
• Description: Salmo salar ssa-miR-132-4-5p mature miRNA
• Sequence: 1 - ACCGUGGCAUUAGAUUGUUACU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482