Stem-loop ssa-mir-133a-1

Accession

MI0026480

Description

Salmo salar ssa-mir-133a-1 precursor miRNA

Sequence

AGCUGGUAAAAUGGAACCAAAucaacuguucaauggauUUGGUCCCCUUCAACCAGCUGU
(((((((..((.((.((((((((............)))))))).)).))..)))))))..

Structure

--       AA  U  A        aacug 
  AGCUGGU  AA GG ACCAAAuc     u
  |||||||  || || ||||||||      
  UCGACCA  UU CC UGGUUuag     u
UG       AC  C  C        guaac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-133a-5p

• Accession: MIMAT0032337
• Description: Salmo salar ssa-miR-133a-5p mature miRNA
• Sequence: 1 - AGCUGGUAAAAUGGAACCAAA - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-133a-3p

• Accession: MIMAT0032338
• Description: Salmo salar ssa-miR-133a-3p mature miRNA
• Sequence: 39 - UUGGUCCCCUUCAACCAGCUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482