Stem-loop ssa-mir-133b-1

Accession

MI0026481

Description

Salmo salar ssa-mir-133b-1 precursor miRNA

Sequence

GCUGGUCAAACGGAACCAAGUCagguguuuuagugaggUUUGGUCCCCUUCAACCAGCU
((((((..((.((.(((((((((..........)))..)))))).)).))..)))))).

Structure

-      CA  C  A      --   ggug 
 GCUGGU  AA GG ACCAAG  UCa    u
 ||||||  || || ||||||  |||     
 CGACCA  UU CC UGGUUU  agu    u
U      AC  C  C      gg   gauu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-133b-5p

• Accession: MIMAT0032339
• Description: Salmo salar ssa-miR-133b-5p mature miRNA
• Sequence: 1 - GCUGGUCAAACGGAACCAAGUC - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-133b-3p

• Accession: MIMAT0032340
• Description: Salmo salar ssa-miR-133b-3p mature miRNA
• Sequence: 39 - UUUGGUCCCCUUCAACCAGCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482